Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 AC092902.6-201ENST00000641783 218 ntBASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 TSEN15P1-201ENST00000423257 515 ntBASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 ACTG1P14-201ENST00000446382 1122 ntBASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 AL513480.1-201ENST00000451731 511 ntBASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 AP000344.2-201ENST00000512987 629 ntBASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 MIR4321-201ENST00000592276 80 ntBASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 AC068137.2-201ENST00000605408 478 ntBASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXP3Q9BZS1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 NORAD-201ENST00000565493 5339 ntBASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms