Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 AC125238.2-201ENST00000430003 1440 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 RIOK3P1-201ENST00000418778 1528 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 RBMS3-209ENST00000452462 1547 ntAPPRIS ALT1 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC073314.1-201ENST00000568729 2216 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 Y_RNA.132-201ENST00000363421 102 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 Y_RNA.142-201ENST00000363491 102 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 SMIM21-201ENST00000382638 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 Y_RNA.419-201ENST00000384041 102 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AL079342.2-201ENST00000403367 482 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AL590084.1-201ENST00000407885 387 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC113618.1-201ENST00000416747 285 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC007742.1-201ENST00000425789 329 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 ELOCP26-201ENST00000436067 329 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 PMCHL2-203ENST00000457791 237 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 ABHD17AP3-201ENST00000503096 1137 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 ARL2BPP4-201ENST00000506854 471 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AP003692.1-202ENST00000510185 502 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 TCP11X3P-202ENST00000514289 1254 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC121758.1-202ENST00000556917 658 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC020661.2-201ENST00000560114 134 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 ANP32BP1-201ENST00000564205 1297 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 PCMTD1P2-201ENST00000565017 355 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AF067845.1-201ENST00000567210 1192 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC060780.3-201ENST00000589464 80 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 WISP1-OT1-201ENST00000602893 642 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AL669831.3-201ENST00000634833 906 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AL590396.3-201ENST00000636334 300 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 FAM157B-203ENST00000639350 358 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 LINC02002-201ENST00000578977 1481 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 AL139385.1-201ENST00000611744 3272 ntBASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-2Q9BYR7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 AC102945.2-201ENST00000623026 1422 ntBASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-2Q9BYR7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms