Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 PCDHA3-202ENST00000532566 4594 ntBASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC104692.2-201ENST00000603054 253 ntBASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC068418.2-201ENST00000577309 3703 ntBASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SHANK2-AS3Q9BTD1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC092127.1-201ENST00000567093 3455 ntBASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC098859.1-201ENST00000502915 1238 ntBASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 RNA5SP419-201ENST00000515908 135 ntBASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 KRT19P2-202ENST00000557173 1012 ntBASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC024267.1-201ENST00000582320 895 ntBASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SHANK2-AS3Q9BTD1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms