Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.93■□□□□ 0.3
PAAF1Q9BRP4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAAF1Q9BRP4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAAF1Q9BRP4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 MIR4259-201ENST00000584466 101 ntBASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 AC017083.2-201ENST00000608069 979 ntBASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 AC084018.2-201ENST00000613093 2607 ntBASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAAF1Q9BRP4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 AC022210.1-201ENST00000449856 793 ntBASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 AC119751.2-201ENST00000504529 210 ntBASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 USP32P1-208ENST00000506594 1164 ntBASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 SNX29P1-201ENST00000548357 1007 ntBASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 AC133539.2-201ENST00000604757 467 ntBASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 AP003680.1-201ENST00000598970 3660 ntBASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 AC011477.6-201ENST00000604980 1927 ntBASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 PKD1P1-201ENST00000458669 6805 ntBASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAAF1Q9BRP4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 KRT8P22-201ENST00000562317 1415 ntBASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 MIR658-201ENST00000385210 100 ntBASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.9■□□□□ 0.3
PAAF1Q9BRP4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms