Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL13Q99616 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.41□□□□□ -0.26
CCL13Q99616 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.41□□□□□ -0.26
CCL13Q99616 TREML5P-201ENST00000421694 576 ntBASIC13.41□□□□□ -0.26
CCL13Q99616 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL13Q99616 IGHV3-42-201ENST00000520410 361 ntBASIC13.41□□□□□ -0.26
CCL13Q99616 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 AC140878.1-201ENST00000565277 250 ntBASIC13.41□□□□□ -0.26
CCL13Q99616 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCL13Q99616 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL13Q99616 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
CCL13Q99616 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL13Q99616 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CCL13Q99616 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL13Q99616 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL13Q99616 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL13Q99616 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL13Q99616 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL13Q99616 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCL13Q99616 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL13Q99616 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CCL13Q99616 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CCL13Q99616 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CCL13Q99616 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CCL13Q99616 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CCL13Q99616 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CCL13Q99616 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL13Q99616 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL13Q99616 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 AC027369.6-201ENST00000525520 931 ntBASIC13.4□□□□□ -0.26
CCL13Q99616 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL13Q99616 RFPL4AP1-201ENST00000530883 850 ntBASIC13.4□□□□□ -0.26
CCL13Q99616 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 AL079307.3-201ENST00000556114 283 ntBASIC13.4□□□□□ -0.26
CCL13Q99616 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL13Q99616 AC027796.2-201ENST00000575326 344 ntBASIC13.4□□□□□ -0.26
CCL13Q99616 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.4□□□□□ -0.26
CCL13Q99616 SPDYE12P-201ENST00000618416 771 ntBASIC13.4□□□□□ -0.26
CCL13Q99616 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CCL13Q99616 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 AC112504.1-201ENST00000623415 1841 ntBASIC13.4□□□□□ -0.26
CCL13Q99616 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 FO538757.1-201ENST00000623083 1397 ntBASIC13.4□□□□□ -0.26
CCL13Q99616 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL13Q99616 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL13Q99616 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCL13Q99616 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL13Q99616 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.27
CCL13Q99616 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
CCL13Q99616 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
CCL13Q99616 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CCL13Q99616 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL13Q99616 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL13Q99616 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL13Q99616 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL13Q99616 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CCL13Q99616 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCL13Q99616 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCL13Q99616 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms