Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 TARDBPP1-201ENST00000442013 1203 ntBASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 SPDYE22P-201ENST00000582158 798 ntBASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 AL662799.1-202ENST00000614205 422 ntBASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 AC069224.1-201ENST00000566372 1715 ntBASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 RPL13P2-201ENST00000440687 659 ntBASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 SPDYE18-201ENST00000510091 1050 ntBASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 HNRNPUP1-201ENST00000554987 333 ntBASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 AC140912.1-201ENST00000577171 1054 ntBASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDK5RAP1Q96SZ6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 SLC7A15P-201ENST00000424028 1363 ntBASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms