Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 AC092364.2-202ENST00000597012 1073 ntBASIC16.47■□□□□ 0.23
RPRD1AQ96P16 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 AC024909.3-201ENST00000611513 2257 ntBASIC16.47■□□□□ 0.23
RPRD1AQ96P16 AL513523.2-202ENST00000427283 2040 ntBASIC16.46■□□□□ 0.23
RPRD1AQ96P16 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 AP003680.1-201ENST00000598970 3660 ntBASIC16.46■□□□□ 0.23
RPRD1AQ96P16 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 MRPS18AP1-201ENST00000414458 589 ntBASIC16.46■□□□□ 0.23
RPRD1AQ96P16 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 AC044860.1-202ENST00000559481 777 ntBASIC16.46■□□□□ 0.23
RPRD1AQ96P16 AC009407.1-201ENST00000568958 598 ntBASIC16.46■□□□□ 0.23
RPRD1AQ96P16 MIR4745-201ENST00000577608 62 ntBASIC16.46■□□□□ 0.23
RPRD1AQ96P16 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RPRD1AQ96P16 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
RPRD1AQ96P16 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
RPRD1AQ96P16 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RPRD1AQ96P16 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RPRD1AQ96P16 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 AC011477.6-201ENST00000604980 1927 ntBASIC16.45■□□□□ 0.22
RPRD1AQ96P16 AL391005.1-201ENST00000623953 2435 ntBASIC16.45■□□□□ 0.22
RPRD1AQ96P16 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 TSPY16P-201ENST00000449843 468 ntBASIC16.45■□□□□ 0.22
RPRD1AQ96P16 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 AL603832.2-201ENST00000566195 2125 ntBASIC16.45■□□□□ 0.22
RPRD1AQ96P16 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPRD1AQ96P16 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms