Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 AL596087.1-201ENST00000400979 1969 ntBASIC16.55■□□□□ 0.24
IFT43Q96FT9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.55■□□□□ 0.24
IFT43Q96FT9 SPCS2P4-201ENST00000436160 681 ntBASIC16.55■□□□□ 0.24
IFT43Q96FT9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 IGHV3-62-201ENST00000520057 340 ntBASIC16.55■□□□□ 0.24
IFT43Q96FT9 LINC01225-203ENST00000563550 1244 ntBASIC16.55■□□□□ 0.24
IFT43Q96FT9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 AC027307.2-201ENST00000591252 911 ntBASIC16.55■□□□□ 0.24
IFT43Q96FT9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IFT43Q96FT9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
IFT43Q96FT9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 RNA5SP421-201ENST00000516864 134 ntBASIC16.54■□□□□ 0.24
IFT43Q96FT9 AC105233.2-201ENST00000523697 349 ntBASIC16.54■□□□□ 0.24
IFT43Q96FT9 AF228730.5-201ENST00000530288 346 ntBASIC16.54■□□□□ 0.24
IFT43Q96FT9 AC069262.1-201ENST00000539058 672 ntBASIC16.54■□□□□ 0.24
IFT43Q96FT9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 AL138918.1-201ENST00000568306 659 ntBASIC16.54■□□□□ 0.24
IFT43Q96FT9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 AC008267.7-201ENST00000624570 1194 ntBASIC16.54■□□□□ 0.24
IFT43Q96FT9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.54■□□□□ 0.24
IFT43Q96FT9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IFT43Q96FT9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms