Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 AC025580.3-201ENST00000617932 1424 ntBASIC14.41□□□□□ -0.1
PTP4A1Q93096 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTP4A1Q93096 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
PTP4A1Q93096 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 MED15P5-201ENST00000423150 992 ntBASIC14.4□□□□□ -0.1
PTP4A1Q93096 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 KRT18P2-201ENST00000447938 1258 ntBASIC14.4□□□□□ -0.1
PTP4A1Q93096 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 AC140113.2-201ENST00000604370 208 ntBASIC14.4□□□□□ -0.1
PTP4A1Q93096 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 AC004877.2-201ENST00000623941 599 ntBASIC14.4□□□□□ -0.1
PTP4A1Q93096 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 AC112693.3-201ENST00000624819 1983 ntBASIC14.4□□□□□ -0.1
PTP4A1Q93096 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.4□□□□□ -0.1
PTP4A1Q93096 PMS2P7-201ENST00000506558 1336 ntBASIC14.4□□□□□ -0.1
PTP4A1Q93096 BCAR1-209ENST00000546196 1340 ntBASIC14.4□□□□□ -0.1
PTP4A1Q93096 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTP4A1Q93096 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.4□□□□□ -0.1
PTP4A1Q93096 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
PTP4A1Q93096 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms