Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 AC087499.5-201ENST00000452760 1342 ntBASIC16.9■□□□□ 0.3
ATP2A3Q93084 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP2A3Q93084 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATP2A3Q93084 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A3Q93084 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 ME2P1-201ENST00000426028 1970 ntBASIC16.88■□□□□ 0.29
ATP2A3Q93084 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 RPL37AP1-201ENST00000412502 279 ntBASIC16.88■□□□□ 0.29
ATP2A3Q93084 GAPDHP21-201ENST00000450301 1010 ntBASIC16.88■□□□□ 0.29
ATP2A3Q93084 AC009477.1-201ENST00000452936 217 ntBASIC16.88■□□□□ 0.29
ATP2A3Q93084 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 AC024267.1-201ENST00000582320 895 ntBASIC16.88■□□□□ 0.29
ATP2A3Q93084 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 MTHFR-217ENST00000641820 1569 ntBASIC16.88■□□□□ 0.29
ATP2A3Q93084 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A3Q93084 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ATP2A3Q93084 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms