Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 C2orf27AP3-201ENST00000434123 579 ntBASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 AL354718.3-201ENST00000616414 581 ntBASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 CR382287.1-201ENST00000623954 586 ntBASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 PRSS30P-206ENST00000641773 873 ntBASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CASKIN1Q8WXD9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 ZNF767P-206ENST00000513792 565 ntBASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 NOP2-211ENST00000540228 668 ntTSL 2 BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 AC145423.3-201ENST00000615987 467 ntBASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 AC020763.4-201ENST00000623414 4170 ntBASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 AL603832.2-201ENST00000566195 2125 ntBASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 AC006449.5-201ENST00000610658 2098 ntBASIC24.36■■□□□ 1.49
CASKIN1Q8WXD9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 KRT18P25-201ENST00000508931 1278 ntBASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 AC138951.2-201ENST00000623455 1161 ntBASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 BX539320.1-201ENST00000623759 877 ntBASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 CYP2T1P-202ENST00000641596 2535 ntBASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 AC026471.1-201ENST00000564629 3026 ntBASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 KLF2P2-201ENST00000416807 1039 ntBASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 RPL13AP20-201ENST00000459725 609 ntBASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 AC020916.1-201ENST00000587762 1774 ntBASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASKIN1Q8WXD9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CASKIN1Q8WXD9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC24.34■■□□□ 1.49
CASKIN1Q8WXD9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC24.34■■□□□ 1.49
CASKIN1Q8WXD9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC24.34■■□□□ 1.49
CASKIN1Q8WXD9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASKIN1Q8WXD9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CASKIN1Q8WXD9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASKIN1Q8WXD9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC24.34■■□□□ 1.49
CASKIN1Q8WXD9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms