Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 RHOQP3-201ENST00000437982 621 ntBASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 AL109954.1-202ENST00000564051 2148 ntBASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 AC064836.3-201ENST00000607928 673 ntBASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RTN4IP1Q8WWV3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RTN4IP1Q8WWV3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 AC007967.2-201ENST00000432613 625 ntBASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 AC023141.13-201ENST00000604991 943 ntBASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 AC007064.4-201ENST00000637740 555 ntBASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 FAM45BP-202ENST00000592932 1624 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms