Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 PTCHD3P3-201ENST00000403073 906 ntBASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 IGHV3-47-201ENST00000425060 335 ntBASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM4Q8WVI0 MIR600HG-201ENST00000449175 5984 ntBASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.71□□□□□ -0.22
SMIM4Q8WVI0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 AC006504.5-208ENST00000588784 2401 ntBASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 DRAXINP1-201ENST00000437611 948 ntBASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 AL136038.3-201ENST00000561909 1096 ntBASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM4Q8WVI0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AC129492.6-201ENST00000611383 1305 ntBASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms