Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 AC078991.1-201ENST00000437297 610 ntBASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 AC073150.1-201ENST00000450406 1084 ntBASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 AC138894.2-201ENST00000602838 371 ntBASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
COL22A1Q8NFW1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 AL157791.1-201ENST00000553667 1699 ntBASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 AC087045.2-201ENST00000606279 1003 ntBASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 AL603764.1-201ENST00000636452 321 ntBASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COL22A1Q8NFW1 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 AC009779.1-201ENST00000551138 283 ntBASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.72■□□□□ 0.91
COL22A1Q8NFW1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 DNAJB1P1-201ENST00000429417 1024 ntBASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AC092171.5-201ENST00000608012 942 ntBASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AC068880.1-201ENST00000507289 2297 ntBASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms