Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 FAM86LP-201ENST00000478302 853 ntBASIC16.36■□□□□ 0.21
SIX5Q8N196 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SIX5Q8N196 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.36■□□□□ 0.21
SIX5Q8N196 ENPP7P5-201ENST00000541031 1031 ntBASIC16.36■□□□□ 0.21
SIX5Q8N196 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 C2orf69P2-201ENST00000562032 1123 ntBASIC16.36■□□□□ 0.21
SIX5Q8N196 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 AL139011.1-202ENST00000642063 584 ntBASIC16.36■□□□□ 0.21
SIX5Q8N196 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SIX5Q8N196 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SIX5Q8N196 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.36■□□□□ 0.21
SIX5Q8N196 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX5Q8N196 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SIX5Q8N196 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SIX5Q8N196 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SIX5Q8N196 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SIX5Q8N196 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SIX5Q8N196 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX5Q8N196 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.35■□□□□ 0.21
SIX5Q8N196 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX5Q8N196 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SIX5Q8N196 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SIX5Q8N196 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SIX5Q8N196 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.35■□□□□ 0.21
SIX5Q8N196 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX5Q8N196 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.35■□□□□ 0.21
SIX5Q8N196 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.35■□□□□ 0.21
SIX5Q8N196 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
SIX5Q8N196 KRT8P13-201ENST00000463294 1010 ntBASIC16.35■□□□□ 0.21
SIX5Q8N196 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.35■□□□□ 0.21
SIX5Q8N196 FTH1P14-201ENST00000482930 551 ntBASIC16.35■□□□□ 0.21
SIX5Q8N196 AC120057.1-201ENST00000483947 663 ntBASIC16.35■□□□□ 0.21
SIX5Q8N196 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX5Q8N196 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX5Q8N196 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.35■□□□□ 0.21
SIX5Q8N196 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.35■□□□□ 0.21
SIX5Q8N196 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX5Q8N196 RN7SL560P-201ENST00000577943 264 ntBASIC16.35■□□□□ 0.21
SIX5Q8N196 RN7SL190P-201ENST00000582519 257 ntBASIC16.35■□□□□ 0.21
SIX5Q8N196 BRI3BPP1-201ENST00000594224 787 ntBASIC16.35■□□□□ 0.21
SIX5Q8N196 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.35■□□□□ 0.21
SIX5Q8N196 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.35■□□□□ 0.21
SIX5Q8N196 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX5Q8N196 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.35■□□□□ 0.21
SIX5Q8N196 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX5Q8N196 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX5Q8N196 AC008764.6-201ENST00000595909 2069 ntBASIC16.34■□□□□ 0.21
SIX5Q8N196 AC006538.1-201ENST00000567905 1585 ntBASIC16.34■□□□□ 0.21
SIX5Q8N196 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.34■□□□□ 0.21
SIX5Q8N196 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.34■□□□□ 0.21
SIX5Q8N196 SOCS2P1-201ENST00000417727 557 ntBASIC16.34■□□□□ 0.21
SIX5Q8N196 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.34■□□□□ 0.21
SIX5Q8N196 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
SIX5Q8N196 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SIX5Q8N196 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.34■□□□□ 0.21
SIX5Q8N196 RNA5SP423-201ENST00000517127 109 ntBASIC16.34■□□□□ 0.21
SIX5Q8N196 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.34■□□□□ 0.21
SIX5Q8N196 AC079316.1-201ENST00000548397 411 ntBASIC16.34■□□□□ 0.21
SIX5Q8N196 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.34■□□□□ 0.21
SIX5Q8N196 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SIX5Q8N196 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.34■□□□□ 0.21
SIX5Q8N196 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms