Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 KRT18P13-201ENST00000400056 1290 ntBASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 AC010326.4-201ENST00000604665 891 ntBASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 AC134684.3-201ENST00000641758 218 ntBASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 AL162727.3-201ENST00000635661 2787 ntBASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 BNIP3P1-202ENST00000550043 1585 ntBASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 NORAD-201ENST00000565493 5339 ntBASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 AC254562.1-201ENST00000417586 456 ntBASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 AL596442.2-201ENST00000610240 980 ntBASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CCDC116Q8IYX3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 AC068587.6-202ENST00000641839 5619 ntBASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 CNN2P11-201ENST00000429351 262 ntBASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 GPS2P2-201ENST00000430745 888 ntBASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 AL139010.1-201ENST00000454878 894 ntBASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC116Q8IYX3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms