Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 TPRX2P-201ENST00000535362 881 ntBASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 TIMM17BP1-201ENST00000545713 516 ntBASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 AC084018.2-201ENST00000613093 2607 ntBASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN4BQ8IWT1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
SCN4BQ8IWT1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCN4BQ8IWT1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 MIR648-201ENST00000385046 94 ntBASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 AL353779.1-201ENST00000434793 351 ntBASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 EEF1DP4-201ENST00000446006 880 ntBASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 AC025048.6-201ENST00000634326 1161 ntBASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.83■□□□□ 0.28
SCN4BQ8IWT1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 REXO1L1P-202ENST00000608646 1974 ntBASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 AC005034.1-201ENST00000426657 489 ntBASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 DFFBP1-201ENST00000433250 979 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms