Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PTCHD3P3-201ENST00000403073 906 ntBASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 AC097376.2-205ENST00000610159 5334 ntBASIC16.07■□□□□ 0.16
CRLF3Q8IUI8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 AC007967.2-201ENST00000432613 625 ntBASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 AL591424.1-201ENST00000442569 1213 ntBASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 AC108751.1-201ENST00000490852 363 ntBASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 AC138035.3-201ENST00000622706 2791 ntBASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CRLF3Q8IUI8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 KRT18P13-201ENST00000400056 1290 ntBASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 KRT18P3-201ENST00000451602 1288 ntBASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 AC107918.2-201ENST00000530817 355 ntBASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 AC092865.5-201ENST00000545435 363 ntBASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.05■□□□□ 0.16
CRLF3Q8IUI8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms