Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 CLK3P2-201ENST00000427566 1453 ntBASIC17.78■□□□□ 0.44
TRIM50Q86XT4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 RARRES2P5-201ENST00000564013 466 ntBASIC17.78■□□□□ 0.44
TRIM50Q86XT4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 HAUS4P1-201ENST00000406739 1145 ntBASIC17.77■□□□□ 0.44
TRIM50Q86XT4 AC011495.1-201ENST00000498085 584 ntBASIC17.77■□□□□ 0.44
TRIM50Q86XT4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM50Q86XT4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM50Q86XT4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 AC018892.3-201ENST00000623986 2499 ntBASIC17.76■□□□□ 0.43
TRIM50Q86XT4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 ATP5G2P4-201ENST00000442175 420 ntBASIC17.76■□□□□ 0.43
TRIM50Q86XT4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 IGHV3-71-201ENST00000523324 359 ntBASIC17.76■□□□□ 0.43
TRIM50Q86XT4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 RRP7BP-205ENST00000566851 833 ntBASIC17.76■□□□□ 0.43
TRIM50Q86XT4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 REXO1L1P-202ENST00000608646 1974 ntBASIC17.76■□□□□ 0.43
TRIM50Q86XT4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRIM50Q86XT4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM50Q86XT4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms