Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 FAM207CP-201ENST00000443486 507 ntBASIC14.2□□□□□ -0.14
RTTNQ86VV8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 AL365330.1-201ENST00000607459 531 ntBASIC14.2□□□□□ -0.14
RTTNQ86VV8 AC084121.4-201ENST00000641598 221 ntBASIC14.2□□□□□ -0.14
RTTNQ86VV8 AF228730.8-201ENST00000642140 221 ntBASIC14.2□□□□□ -0.14
RTTNQ86VV8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 AL162727.3-201ENST00000635661 2787 ntBASIC14.2□□□□□ -0.14
RTTNQ86VV8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTTNQ86VV8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.2□□□□□ -0.14
RTTNQ86VV8 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.19□□□□□ -0.14
RTTNQ86VV8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 LINC00628-201ENST00000628516 1289 ntBASIC14.19□□□□□ -0.14
RTTNQ86VV8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 AL390955.2-201ENST00000603032 514 ntBASIC14.19□□□□□ -0.14
RTTNQ86VV8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 AL358472.5-202ENST00000641448 1267 ntBASIC14.19□□□□□ -0.14
RTTNQ86VV8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 AL592424.1-201ENST00000563624 1536 ntBASIC14.19□□□□□ -0.14
RTTNQ86VV8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
RTTNQ86VV8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RTTNQ86VV8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RTTNQ86VV8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
RTTNQ86VV8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RTTNQ86VV8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTTNQ86VV8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
RTTNQ86VV8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.18□□□□□ -0.14
RTTNQ86VV8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTTNQ86VV8 AL365203.3-201ENST00000609742 2057 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms