Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRA2BP62995 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.05■□□□□ 0
TRA2BP62995 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.05■□□□□ 0
TRA2BP62995 AC105250.1-201ENST00000509378 2057 ntBASIC15.05■□□□□ 0
TRA2BP62995 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.05■□□□□ 0
TRA2BP62995 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRA2BP62995 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRA2BP62995 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRA2BP62995 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRA2BP62995 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRA2BP62995 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.05■□□□□ 0
TRA2BP62995 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRA2BP62995 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRA2BP62995 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.05■□□□□ -0
TRA2BP62995 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
TRA2BP62995 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.05■□□□□ -0
TRA2BP62995 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRA2BP62995 AZGP1P1-201ENST00000411909 902 ntBASIC15.05■□□□□ -0
TRA2BP62995 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.05■□□□□ -0
TRA2BP62995 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.05■□□□□ -0
TRA2BP62995 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.05■□□□□ -0
TRA2BP62995 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.05■□□□□ -0
TRA2BP62995 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.05■□□□□ -0
TRA2BP62995 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.05■□□□□ -0
TRA2BP62995 AC027612.4-201ENST00000605371 583 ntBASIC15.05■□□□□ -0
TRA2BP62995 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.05■□□□□ -0
TRA2BP62995 LINC00628-201ENST00000628516 1289 ntBASIC15.05■□□□□ -0
TRA2BP62995 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.05■□□□□ -0
TRA2BP62995 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ -0
TRA2BP62995 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRA2BP62995 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.04■□□□□ -0
TRA2BP62995 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 AC132872.4-202ENST00000622924 2756 ntBASIC15.04■□□□□ -0
TRA2BP62995 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.04■□□□□ -0
TRA2BP62995 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.04■□□□□ -0
TRA2BP62995 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.04■□□□□ -0
TRA2BP62995 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.04■□□□□ -0
TRA2BP62995 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 AC087481.3-201ENST00000602886 1894 ntBASIC15.04■□□□□ -0
TRA2BP62995 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.04■□□□□ -0
TRA2BP62995 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 MIR1233-2-201ENST00000408138 82 ntBASIC15.04■□□□□ -0
TRA2BP62995 MIR1233-1-201ENST00000408722 82 ntBASIC15.04■□□□□ -0
TRA2BP62995 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.04■□□□□ -0
TRA2BP62995 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TRA2BP62995 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.04■□□□□ -0
TRA2BP62995 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.04■□□□□ -0
TRA2BP62995 HIST3H2BA-201ENST00000436555 524 ntBASIC15.04■□□□□ -0
TRA2BP62995 MTND6P24-201ENST00000440466 518 ntBASIC15.04■□□□□ -0
TRA2BP62995 DNAJB3-202ENST00000449667 1266 ntBASIC15.04■□□□□ -0
TRA2BP62995 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.04■□□□□ -0
TRA2BP62995 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.04■□□□□ -0
TRA2BP62995 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.04■□□□□ -0
TRA2BP62995 AL079307.3-201ENST00000556114 283 ntBASIC15.04■□□□□ -0
TRA2BP62995 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.04■□□□□ -0
TRA2BP62995 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.04■□□□□ -0
TRA2BP62995 AL596442.2-201ENST00000610240 980 ntBASIC15.04■□□□□ -0
TRA2BP62995 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRA2BP62995 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 CICP13-201ENST00000422015 2789 ntBASIC15.04■□□□□ -0
TRA2BP62995 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.04■□□□□ -0
TRA2BP62995 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRA2BP62995 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRA2BP62995 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.04■□□□□ -0
TRA2BP62995 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRA2BP62995 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRA2BP62995 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRA2BP62995 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRA2BP62995 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms