Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.67■□□□□ 0.26
ERVFC1P60507 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.67■□□□□ 0.26
ERVFC1P60507 AC004945.1-201ENST00000416738 983 ntBASIC16.67■□□□□ 0.26
ERVFC1P60507 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERVFC1P60507 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.67■□□□□ 0.26
ERVFC1P60507 AC025279.2-201ENST00000569730 653 ntBASIC16.67■□□□□ 0.26
ERVFC1P60507 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.67■□□□□ 0.26
ERVFC1P60507 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.67■□□□□ 0.26
ERVFC1P60507 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.67■□□□□ 0.26
ERVFC1P60507 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.67■□□□□ 0.26
ERVFC1P60507 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ERVFC1P60507 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.67■□□□□ 0.26
ERVFC1P60507 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ERVFC1P60507 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERVFC1P60507 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.67■□□□□ 0.26
ERVFC1P60507 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERVFC1P60507 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERVFC1P60507 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
ERVFC1P60507 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.66■□□□□ 0.26
ERVFC1P60507 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
ERVFC1P60507 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.66■□□□□ 0.26
ERVFC1P60507 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.66■□□□□ 0.26
ERVFC1P60507 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.66■□□□□ 0.26
ERVFC1P60507 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ERVFC1P60507 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ERVFC1P60507 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.66■□□□□ 0.26
ERVFC1P60507 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 AC006033.1-201ENST00000440505 426 ntBASIC16.66■□□□□ 0.26
ERVFC1P60507 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.66■□□□□ 0.26
ERVFC1P60507 KRT8P13-201ENST00000463294 1010 ntBASIC16.66■□□□□ 0.26
ERVFC1P60507 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.66■□□□□ 0.26
ERVFC1P60507 AP001582.1-201ENST00000525856 295 ntBASIC16.66■□□□□ 0.26
ERVFC1P60507 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.66■□□□□ 0.26
ERVFC1P60507 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.66■□□□□ 0.26
ERVFC1P60507 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 AC107373.2-201ENST00000607735 490 ntBASIC16.66■□□□□ 0.26
ERVFC1P60507 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.66■□□□□ 0.26
ERVFC1P60507 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.66■□□□□ 0.26
ERVFC1P60507 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERVFC1P60507 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ERVFC1P60507 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERVFC1P60507 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERVFC1P60507 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.66■□□□□ 0.26
ERVFC1P60507 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERVFC1P60507 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERVFC1P60507 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.66■□□□□ 0.26
ERVFC1P60507 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.66■□□□□ 0.26
ERVFC1P60507 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.66■□□□□ 0.26
ERVFC1P60507 AC018892.3-201ENST00000623986 2499 ntBASIC16.65■□□□□ 0.26
ERVFC1P60507 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ERVFC1P60507 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.65■□□□□ 0.26
ERVFC1P60507 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ERVFC1P60507 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ERVFC1P60507 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.65■□□□□ 0.26
ERVFC1P60507 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.65■□□□□ 0.26
ERVFC1P60507 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.65■□□□□ 0.26
ERVFC1P60507 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.65■□□□□ 0.26
ERVFC1P60507 AC023310.1-201ENST00000554836 735 ntBASIC16.65■□□□□ 0.26
ERVFC1P60507 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.65■□□□□ 0.26
ERVFC1P60507 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.65■□□□□ 0.26
ERVFC1P60507 AC093813.1-201ENST00000605066 256 ntBASIC16.65■□□□□ 0.26
ERVFC1P60507 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.65■□□□□ 0.26
ERVFC1P60507 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.65■□□□□ 0.26
ERVFC1P60507 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ERVFC1P60507 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ERVFC1P60507 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERVFC1P60507 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms