Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN8P56748 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLDN8P56748 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN8P56748 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLDN8P56748 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 AC112693.3-201ENST00000624819 1983 ntBASIC15.22■□□□□ 0.03
CLDN8P56748 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN8P56748 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLDN8P56748 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN8P56748 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 AL590627.1-203ENST00000421194 1026 ntBASIC15.22■□□□□ 0.03
CLDN8P56748 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN8P56748 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN8P56748 FAM86C2P-203ENST00000528684 1004 ntBASIC15.22■□□□□ 0.03
CLDN8P56748 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.22■□□□□ 0.03
CLDN8P56748 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLDN8P56748 AC140113.2-201ENST00000604370 208 ntBASIC15.22■□□□□ 0.03
CLDN8P56748 AC027601.4-201ENST00000611259 610 ntBASIC15.22■□□□□ 0.03
CLDN8P56748 FAM197Y3-203ENST00000618346 717 ntBASIC15.22■□□□□ 0.03
CLDN8P56748 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLDN8P56748 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN8P56748 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN8P56748 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN8P56748 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLDN8P56748 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN8P56748 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLDN8P56748 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN8P56748 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN8P56748 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN8P56748 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN8P56748 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN8P56748 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CLDN8P56748 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN8P56748 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN8P56748 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN8P56748 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN8P56748 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN8P56748 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN8P56748 RNA5SP410-201ENST00000516285 106 ntBASIC15.21■□□□□ 0.03
CLDN8P56748 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.21■□□□□ 0.03
CLDN8P56748 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 AC106730.1-201ENST00000566722 1090 ntBASIC15.21■□□□□ 0.03
CLDN8P56748 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN8P56748 BX640515.1-201ENST00000617215 977 ntBASIC15.21■□□□□ 0.03
CLDN8P56748 AC091812.2-201ENST00000619081 385 ntBASIC15.21■□□□□ 0.03
CLDN8P56748 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN8P56748 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN8P56748 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLDN8P56748 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN8P56748 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN8P56748 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN8P56748 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.21■□□□□ 0.02
CLDN8P56748 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN8P56748 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN8P56748 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN8P56748 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN8P56748 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN8P56748 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
CLDN8P56748 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CLDN8P56748 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN8P56748 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms