Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AL645939.2-201ENST00000427340 991 ntBASIC17.12■□□□□ 0.33
RAD23BP54727 KLF2P3-201ENST00000451977 1087 ntBASIC17.12■□□□□ 0.33
RAD23BP54727 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.12■□□□□ 0.33
RAD23BP54727 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAD23BP54727 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAD23BP54727 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAD23BP54727 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAD23BP54727 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAD23BP54727 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAD23BP54727 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAD23BP54727 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAD23BP54727 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAD23BP54727 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAD23BP54727 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RAD23BP54727 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAD23BP54727 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.11■□□□□ 0.33
RAD23BP54727 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAD23BP54727 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.11■□□□□ 0.33
RAD23BP54727 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.11■□□□□ 0.33
RAD23BP54727 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 FAM86GP-201ENST00000448322 971 ntBASIC17.11■□□□□ 0.33
RAD23BP54727 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.11■□□□□ 0.33
RAD23BP54727 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 AC125807.1-201ENST00000483097 614 ntBASIC17.11■□□□□ 0.33
RAD23BP54727 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.11■□□□□ 0.33
RAD23BP54727 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.11■□□□□ 0.33
RAD23BP54727 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.11■□□□□ 0.33
RAD23BP54727 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.11■□□□□ 0.33
RAD23BP54727 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD23BP54727 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD23BP54727 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.11■□□□□ 0.33
RAD23BP54727 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RAD23BP54727 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD23BP54727 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD23BP54727 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAD23BP54727 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RAD23BP54727 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 AC011477.6-201ENST00000604980 1927 ntBASIC17.1■□□□□ 0.33
RAD23BP54727 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAD23BP54727 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAD23BP54727 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAD23BP54727 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAD23BP54727 SPDYE17-201ENST00000412399 783 ntBASIC17.1■□□□□ 0.33
RAD23BP54727 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.1■□□□□ 0.33
RAD23BP54727 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.1■□□□□ 0.33
RAD23BP54727 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.1■□□□□ 0.33
RAD23BP54727 AC067863.1-201ENST00000494933 530 ntBASIC17.1■□□□□ 0.33
RAD23BP54727 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAD23BP54727 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 AC140878.1-201ENST00000565277 250 ntBASIC17.1■□□□□ 0.33
RAD23BP54727 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD23BP54727 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD23BP54727 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD23BP54727 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
RAD23BP54727 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAD23BP54727 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.1■□□□□ 0.33
RAD23BP54727 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAD23BP54727 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAD23BP54727 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.1■□□□□ 0.33
RAD23BP54727 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms