Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC9A3P48764 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC9A3P48764 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC9A3P48764 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC9A3P48764 HAUS4P1-201ENST00000406739 1145 ntBASIC14.75□□□□□ -0.05
SLC9A3P48764 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC9A3P48764 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC9A3P48764 AC092474.2-201ENST00000424288 719 ntBASIC14.75□□□□□ -0.05
SLC9A3P48764 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.75□□□□□ -0.05
SLC9A3P48764 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SLC9A3P48764 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC9A3P48764 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC9A3P48764 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC9A3P48764 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC9A3P48764 AC008677.1-201ENST00000519230 1561 ntBASIC14.75□□□□□ -0.05
SLC9A3P48764 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC9A3P48764 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC9A3P48764 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC9A3P48764 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC9A3P48764 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC9A3P48764 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC9A3P48764 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC9A3P48764 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC9A3P48764 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC9A3P48764 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC9A3P48764 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC9A3P48764 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC9A3P48764 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
SLC9A3P48764 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC9A3P48764 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 MRPL3P1-201ENST00000400109 1033 ntBASIC14.74□□□□□ -0.05
SLC9A3P48764 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 AC140658.5-201ENST00000438532 169 ntBASIC14.74□□□□□ -0.05
SLC9A3P48764 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC9A3P48764 RNA5SP419-201ENST00000515908 135 ntBASIC14.74□□□□□ -0.05
SLC9A3P48764 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.74□□□□□ -0.05
SLC9A3P48764 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC9A3P48764 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SLC9A3P48764 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC9A3P48764 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC9A3P48764 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC9A3P48764 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
SLC9A3P48764 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC9A3P48764 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.74□□□□□ -0.05
SLC9A3P48764 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC9A3P48764 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC9A3P48764 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SLC9A3P48764 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC9A3P48764 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC9A3P48764 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SLC9A3P48764 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC9A3P48764 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC9A3P48764 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC9A3P48764 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC9A3P48764 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC9A3P48764 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SLC9A3P48764 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC9A3P48764 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC9A3P48764 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC9A3P48764 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC9A3P48764 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SLC9A3P48764 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms