Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF4P48230 AC073413.1-201ENST00000603927 732 ntBASIC17.87■□□□□ 0.45
TM4SF4P48230 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.87■□□□□ 0.45
TM4SF4P48230 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.87■□□□□ 0.45
TM4SF4P48230 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF4P48230 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF4P48230 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF4P48230 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TM4SF4P48230 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF4P48230 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.87■□□□□ 0.45
TM4SF4P48230 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF4P48230 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF4P48230 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
TM4SF4P48230 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
TM4SF4P48230 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TM4SF4P48230 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.86■□□□□ 0.45
TM4SF4P48230 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.86■□□□□ 0.45
TM4SF4P48230 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.86■□□□□ 0.45
TM4SF4P48230 AC098935.1-201ENST00000446057 611 ntBASIC17.86■□□□□ 0.45
TM4SF4P48230 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.86■□□□□ 0.45
TM4SF4P48230 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF4P48230 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.86■□□□□ 0.45
TM4SF4P48230 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF4P48230 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF4P48230 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.86■□□□□ 0.45
TM4SF4P48230 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.86■□□□□ 0.45
TM4SF4P48230 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF4P48230 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF4P48230 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 RN7SL736P-201ENST00000613111 269 ntBASIC17.86■□□□□ 0.45
TM4SF4P48230 AL353770.1-201ENST00000614915 403 ntBASIC17.86■□□□□ 0.45
TM4SF4P48230 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TM4SF4P48230 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TM4SF4P48230 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF4P48230 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF4P48230 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
TM4SF4P48230 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.85■□□□□ 0.45
TM4SF4P48230 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 AC026316.1-201ENST00000398900 414 ntBASIC17.85■□□□□ 0.45
TM4SF4P48230 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TM4SF4P48230 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.85■□□□□ 0.45
TM4SF4P48230 AC006335.1-201ENST00000445200 547 ntBASIC17.85■□□□□ 0.45
TM4SF4P48230 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.85■□□□□ 0.45
TM4SF4P48230 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
TM4SF4P48230 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TM4SF4P48230 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
TM4SF4P48230 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.85■□□□□ 0.45
TM4SF4P48230 AC013355.1-201ENST00000562625 723 ntBASIC17.85■□□□□ 0.45
TM4SF4P48230 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TM4SF4P48230 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.85■□□□□ 0.45
TM4SF4P48230 BNIP3P13-201ENST00000599968 566 ntBASIC17.85■□□□□ 0.45
TM4SF4P48230 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.85■□□□□ 0.45
TM4SF4P48230 AL805961.1-203ENST00000641078 1258 ntBASIC17.85■□□□□ 0.45
TM4SF4P48230 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TM4SF4P48230 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF4P48230 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.85■□□□□ 0.45
TM4SF4P48230 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TM4SF4P48230 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.84■□□□□ 0.45
TM4SF4P48230 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.84■□□□□ 0.45
TM4SF4P48230 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TM4SF4P48230 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
TM4SF4P48230 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TM4SF4P48230 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.84■□□□□ 0.45
TM4SF4P48230 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms