Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGCLP35914 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGCLP35914 TSSK5P-201ENST00000423978 907 ntBASIC15.88■□□□□ 0.13
HMGCLP35914 RN7SL618P-201ENST00000477850 296 ntBASIC15.88■□□□□ 0.13
HMGCLP35914 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.88■□□□□ 0.13
HMGCLP35914 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGCLP35914 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGCLP35914 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGCLP35914 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGCLP35914 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
HMGCLP35914 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGCLP35914 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGCLP35914 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGCLP35914 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCLP35914 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCLP35914 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCLP35914 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.87■□□□□ 0.13
HMGCLP35914 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
HMGCLP35914 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.87■□□□□ 0.13
HMGCLP35914 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 Z97205.2-201ENST00000564697 1639 ntBASIC15.87■□□□□ 0.13
HMGCLP35914 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HMGCLP35914 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCLP35914 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCLP35914 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
HMGCLP35914 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HMGCLP35914 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.87■□□□□ 0.13
HMGCLP35914 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.87■□□□□ 0.13
HMGCLP35914 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.87■□□□□ 0.13
HMGCLP35914 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCLP35914 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.87■□□□□ 0.13
HMGCLP35914 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.87■□□□□ 0.13
HMGCLP35914 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.87■□□□□ 0.13
HMGCLP35914 AC025048.3-201ENST00000590609 569 ntBASIC15.87■□□□□ 0.13
HMGCLP35914 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
HMGCLP35914 AL844908.2-201ENST00000609461 460 ntBASIC15.87■□□□□ 0.13
HMGCLP35914 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
HMGCLP35914 AC005702.4-201ENST00000618393 416 ntBASIC15.87■□□□□ 0.13
HMGCLP35914 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.87■□□□□ 0.13
HMGCLP35914 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCLP35914 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HMGCLP35914 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HMGCLP35914 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.87■□□□□ 0.13
HMGCLP35914 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCLP35914 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
HMGCLP35914 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCLP35914 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HMGCLP35914 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.86■□□□□ 0.13
HMGCLP35914 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.86■□□□□ 0.13
HMGCLP35914 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HMGCLP35914 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 PAUPAR-201ENST00000630360 2965 ntBASIC15.86■□□□□ 0.13
HMGCLP35914 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
HMGCLP35914 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCLP35914 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.86■□□□□ 0.13
HMGCLP35914 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HMGCLP35914 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.86■□□□□ 0.13
HMGCLP35914 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCLP35914 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCLP35914 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms