Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AL078644.1-201ENST00000609881 752 ntBASIC15.3■□□□□ 0.04
KRT20P35900 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT20P35900 AC099063.4-201ENST00000641099 1602 ntBASIC15.3■□□□□ 0.04
KRT20P35900 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT20P35900 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
KRT20P35900 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 LINC01144-201ENST00000626198 1710 ntBASIC15.29■□□□□ 0.04
KRT20P35900 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KRT20P35900 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.29■□□□□ 0.04
KRT20P35900 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT20P35900 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KRT20P35900 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT20P35900 RARRES2P8-201ENST00000566335 367 ntBASIC15.29■□□□□ 0.04
KRT20P35900 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT20P35900 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
KRT20P35900 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
KRT20P35900 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT20P35900 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KRT20P35900 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
KRT20P35900 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 AC097376.2-205ENST00000610159 5334 ntBASIC15.28■□□□□ 0.04
KRT20P35900 PCDHA3-202ENST00000532566 4594 ntBASIC15.28■□□□□ 0.04
KRT20P35900 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT20P35900 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.28■□□□□ 0.04
KRT20P35900 MKNK2P1-201ENST00000437526 628 ntBASIC15.28■□□□□ 0.04
KRT20P35900 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 AC005829.1-201ENST00000570002 483 ntBASIC15.28■□□□□ 0.04
KRT20P35900 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT20P35900 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT20P35900 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms