Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
TNFSF4P23510 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.73□□□□□ -0.21
TNFSF4P23510 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
TNFSF4P23510 IGHV3-42-201ENST00000520410 361 ntBASIC13.73□□□□□ -0.21
TNFSF4P23510 RFPL4AP1-201ENST00000530883 850 ntBASIC13.73□□□□□ -0.21
TNFSF4P23510 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
TNFSF4P23510 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.73□□□□□ -0.21
TNFSF4P23510 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.73□□□□□ -0.21
TNFSF4P23510 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.73□□□□□ -0.21
TNFSF4P23510 AL589739.1-201ENST00000607720 493 ntBASIC13.73□□□□□ -0.21
TNFSF4P23510 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TNFSF4P23510 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.73□□□□□ -0.21
TNFSF4P23510 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.73□□□□□ -0.21
TNFSF4P23510 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.73□□□□□ -0.21
TNFSF4P23510 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.73□□□□□ -0.21
TNFSF4P23510 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.73□□□□□ -0.21
TNFSF4P23510 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.73□□□□□ -0.21
TNFSF4P23510 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.73□□□□□ -0.21
TNFSF4P23510 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.73□□□□□ -0.21
TNFSF4P23510 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TNFSF4P23510 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.73□□□□□ -0.21
TNFSF4P23510 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TNFSF4P23510 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TNFSF4P23510 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.72□□□□□ -0.21
TNFSF4P23510 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TNFSF4P23510 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.72□□□□□ -0.21
TNFSF4P23510 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TNFSF4P23510 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.72□□□□□ -0.21
TNFSF4P23510 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TNFSF4P23510 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.72□□□□□ -0.21
TNFSF4P23510 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.72□□□□□ -0.21
TNFSF4P23510 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.72□□□□□ -0.21
TNFSF4P23510 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.72□□□□□ -0.21
TNFSF4P23510 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.72□□□□□ -0.21
TNFSF4P23510 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.72□□□□□ -0.21
TNFSF4P23510 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.72□□□□□ -0.21
TNFSF4P23510 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.72□□□□□ -0.21
TNFSF4P23510 AC051619.7-201ENST00000568314 623 ntBASIC13.72□□□□□ -0.21
TNFSF4P23510 RN7SL828P-201ENST00000607615 303 ntBASIC13.72□□□□□ -0.21
TNFSF4P23510 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.72□□□□□ -0.21
TNFSF4P23510 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TNFSF4P23510 AP001282.1-201ENST00000531301 1499 ntBASIC13.72□□□□□ -0.21
TNFSF4P23510 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.72□□□□□ -0.21
TNFSF4P23510 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TNFSF4P23510 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TNFSF4P23510 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TNFSF4P23510 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
TNFSF4P23510 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.71□□□□□ -0.21
TNFSF4P23510 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 AC092850.2-201ENST00000623821 2697 ntBASIC13.71□□□□□ -0.21
TNFSF4P23510 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TNFSF4P23510 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms