Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.21□□□□□ -0.13
CTLA4P16410 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CTLA4P16410 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTLA4P16410 ELL2P1-201ENST00000413990 1906 ntBASIC14.21□□□□□ -0.13
CTLA4P16410 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTLA4P16410 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.21□□□□□ -0.13
CTLA4P16410 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CTLA4P16410 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.21□□□□□ -0.13
CTLA4P16410 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTLA4P16410 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTLA4P16410 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTLA4P16410 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTLA4P16410 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTLA4P16410 AC004987.2-201ENST00000395959 1148 ntBASIC14.21□□□□□ -0.13
CTLA4P16410 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.21□□□□□ -0.13
CTLA4P16410 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 AP000347.1-202ENST00000435868 847 ntBASIC14.21□□□□□ -0.13
CTLA4P16410 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.21□□□□□ -0.13
CTLA4P16410 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.21□□□□□ -0.13
CTLA4P16410 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
CTLA4P16410 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.21□□□□□ -0.13
CTLA4P16410 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 AC084121.4-201ENST00000641598 221 ntBASIC14.21□□□□□ -0.13
CTLA4P16410 AF228730.8-201ENST00000642140 221 ntBASIC14.21□□□□□ -0.13
CTLA4P16410 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.21□□□□□ -0.13
CTLA4P16410 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTLA4P16410 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTLA4P16410 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.21□□□□□ -0.14
CTLA4P16410 AP3S2-216ENST00000617003 1561 ntBASIC14.21□□□□□ -0.14
CTLA4P16410 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CTLA4P16410 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTLA4P16410 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTLA4P16410 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.21□□□□□ -0.14
CTLA4P16410 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.2□□□□□ -0.14
CTLA4P16410 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.2□□□□□ -0.14
CTLA4P16410 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CTLA4P16410 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 CEND1P1-201ENST00000451006 455 ntBASIC14.2□□□□□ -0.14
CTLA4P16410 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.2□□□□□ -0.14
CTLA4P16410 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CTLA4P16410 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.2□□□□□ -0.14
CTLA4P16410 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.2□□□□□ -0.14
CTLA4P16410 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
CTLA4P16410 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.2□□□□□ -0.14
CTLA4P16410 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CTLA4P16410 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTLA4P16410 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.19□□□□□ -0.14
CTLA4P16410 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.19□□□□□ -0.14
CTLA4P16410 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 CYP4F24P-201ENST00000586049 1580 ntBASIC14.19□□□□□ -0.14
CTLA4P16410 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.19□□□□□ -0.14
CTLA4P16410 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms