Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.66■□□□□ 0.1
PCNAP12004 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCNAP12004 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCNAP12004 AL136379.1-201ENST00000623471 2642 ntBASIC15.66■□□□□ 0.1
PCNAP12004 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCNAP12004 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PCNAP12004 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.66■□□□□ 0.1
PCNAP12004 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.66■□□□□ 0.1
PCNAP12004 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCNAP12004 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCNAP12004 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCNAP12004 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCNAP12004 AKAP8P1-201ENST00000434743 1349 ntBASIC15.66■□□□□ 0.1
PCNAP12004 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCNAP12004 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCNAP12004 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCNAP12004 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.65■□□□□ 0.1
PCNAP12004 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.65■□□□□ 0.1
PCNAP12004 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.65■□□□□ 0.1
PCNAP12004 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 AC004832.2-201ENST00000426397 482 ntBASIC15.65■□□□□ 0.1
PCNAP12004 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.65■□□□□ 0.1
PCNAP12004 FAM86C2P-203ENST00000528684 1004 ntBASIC15.65■□□□□ 0.1
PCNAP12004 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.65■□□□□ 0.1
PCNAP12004 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 AC027307.2-201ENST00000591252 911 ntBASIC15.65■□□□□ 0.1
PCNAP12004 MTDHP5-201ENST00000598980 586 ntBASIC15.65■□□□□ 0.1
PCNAP12004 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.65■□□□□ 0.1
PCNAP12004 AL671883.3-201ENST00000603274 991 ntBASIC15.65■□□□□ 0.1
PCNAP12004 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.65■□□□□ 0.1
PCNAP12004 AL365330.1-201ENST00000607459 531 ntBASIC15.65■□□□□ 0.1
PCNAP12004 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
PCNAP12004 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCNAP12004 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PCNAP12004 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCNAP12004 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCNAP12004 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
PCNAP12004 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCNAP12004 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
PCNAP12004 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.64■□□□□ 0.09
PCNAP12004 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.64■□□□□ 0.09
PCNAP12004 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCNAP12004 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.64■□□□□ 0.09
PCNAP12004 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCNAP12004 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCNAP12004 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
PCNAP12004 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.64■□□□□ 0.09
PCNAP12004 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PCNAP12004 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.64■□□□□ 0.09
PCNAP12004 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.64■□□□□ 0.09
PCNAP12004 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
PCNAP12004 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
PCNAP12004 TIMM8BP1-201ENST00000452384 211 ntBASIC15.64■□□□□ 0.09
PCNAP12004 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.64■□□□□ 0.09
PCNAP12004 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.64■□□□□ 0.09
PCNAP12004 RN7SL589P-201ENST00000481268 310 ntBASIC15.64■□□□□ 0.09
PCNAP12004 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCNAP12004 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms