Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.07■□□□□ 0.32
FAM228BP0C875 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.07■□□□□ 0.32
FAM228BP0C875 BX640515.1-201ENST00000617215 977 ntBASIC17.07■□□□□ 0.32
FAM228BP0C875 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.07■□□□□ 0.32
FAM228BP0C875 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.07■□□□□ 0.32
FAM228BP0C875 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FAM228BP0C875 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FAM228BP0C875 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
FAM228BP0C875 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FAM228BP0C875 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.07■□□□□ 0.32
FAM228BP0C875 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FAM228BP0C875 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FAM228BP0C875 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.07■□□□□ 0.32
FAM228BP0C875 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FAM228BP0C875 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.07■□□□□ 0.32
FAM228BP0C875 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
FAM228BP0C875 MST1L-201ENST00000442552 2185 ntBASIC17.06■□□□□ 0.32
FAM228BP0C875 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
FAM228BP0C875 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 MED15P5-201ENST00000423150 992 ntBASIC17.06■□□□□ 0.32
FAM228BP0C875 ADH5P3-201ENST00000433842 1137 ntBASIC17.06■□□□□ 0.32
FAM228BP0C875 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.06■□□□□ 0.32
FAM228BP0C875 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 AL591424.1-201ENST00000442569 1213 ntBASIC17.06■□□□□ 0.32
FAM228BP0C875 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.06■□□□□ 0.32
FAM228BP0C875 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.06■□□□□ 0.32
FAM228BP0C875 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 AC027601.4-201ENST00000611259 610 ntBASIC17.06■□□□□ 0.32
FAM228BP0C875 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 AC092902.6-201ENST00000641783 218 ntBASIC17.06■□□□□ 0.32
FAM228BP0C875 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FAM228BP0C875 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FAM228BP0C875 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
FAM228BP0C875 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
FAM228BP0C875 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
FAM228BP0C875 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FAM228BP0C875 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
FAM228BP0C875 AC004987.2-201ENST00000395959 1148 ntBASIC17.05■□□□□ 0.32
FAM228BP0C875 RPS8P6-201ENST00000426177 609 ntBASIC17.05■□□□□ 0.32
FAM228BP0C875 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.05■□□□□ 0.32
FAM228BP0C875 AC243562.1-201ENST00000560672 389 ntBASIC17.05■□□□□ 0.32
FAM228BP0C875 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.05■□□□□ 0.32
FAM228BP0C875 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 FAM197Y3-203ENST00000618346 717 ntBASIC17.05■□□□□ 0.32
FAM228BP0C875 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
FAM228BP0C875 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.05■□□□□ 0.32
FAM228BP0C875 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.05■□□□□ 0.32
FAM228BP0C875 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FAM228BP0C875 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM228BP0C875 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM228BP0C875 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
FAM228BP0C875 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM228BP0C875 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms