Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
CAPN1P07384 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CAPN1P07384 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN1P07384 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.82■□□□□ 0.12
CAPN1P07384 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN1P07384 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN1P07384 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CAPN1P07384 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN1P07384 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN1P07384 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN1P07384 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
CAPN1P07384 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 MIR770-201ENST00000390219 98 ntBASIC15.82■□□□□ 0.12
CAPN1P07384 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.82■□□□□ 0.12
CAPN1P07384 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 AC005237.2-201ENST00000434368 219 ntBASIC15.82■□□□□ 0.12
CAPN1P07384 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.82■□□□□ 0.12
CAPN1P07384 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CAPN1P07384 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CAPN1P07384 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CAPN1P07384 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN1P07384 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN1P07384 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN1P07384 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN1P07384 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CAPN1P07384 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 GPS2P2-201ENST00000430745 888 ntBASIC15.81■□□□□ 0.12
CAPN1P07384 AC093724.1-201ENST00000448659 1027 ntBASIC15.81■□□□□ 0.12
CAPN1P07384 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CAPN1P07384 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN1P07384 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CAPN1P07384 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CAPN1P07384 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN1P07384 AP003680.1-201ENST00000598970 3660 ntBASIC15.81■□□□□ 0.12
CAPN1P07384 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN1P07384 AC093512.1-201ENST00000617969 520 ntBASIC15.81■□□□□ 0.12
CAPN1P07384 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CAPN1P07384 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CAPN1P07384 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CAPN1P07384 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CAPN1P07384 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN1P07384 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN1P07384 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CAPN1P07384 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPN1P07384 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CAPN1P07384 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
CAPN1P07384 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN1P07384 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CAPN1P07384 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN1P07384 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN1P07384 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN1P07384 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN1P07384 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN1P07384 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN1P07384 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPN1P07384 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN1P07384 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPN1P07384 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms