Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CHGBP05060 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CHGBP05060 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHGBP05060 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHGBP05060 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHGBP05060 AC136604.1-201ENST00000418535 575 ntBASIC19.13■□□□□ 0.65
CHGBP05060 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHGBP05060 MIR3197-201ENST00000582241 73 ntBASIC19.13■□□□□ 0.65
CHGBP05060 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.13■□□□□ 0.65
CHGBP05060 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHGBP05060 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHGBP05060 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.13■□□□□ 0.65
CHGBP05060 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHGBP05060 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CHGBP05060 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.13■□□□□ 0.65
CHGBP05060 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHGBP05060 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHGBP05060 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHGBP05060 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHGBP05060 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CHGBP05060 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHGBP05060 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHGBP05060 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CHGBP05060 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHGBP05060 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.12■□□□□ 0.65
CHGBP05060 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHGBP05060 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.12■□□□□ 0.65
CHGBP05060 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHGBP05060 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHGBP05060 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.12■□□□□ 0.65
CHGBP05060 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.12■□□□□ 0.65
CHGBP05060 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CHGBP05060 AC023310.3-201ENST00000557027 670 ntBASIC19.12■□□□□ 0.65
CHGBP05060 AC100756.1-201ENST00000562736 682 ntBASIC19.12■□□□□ 0.65
CHGBP05060 AC138749.3-201ENST00000567691 622 ntBASIC19.12■□□□□ 0.65
CHGBP05060 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHGBP05060 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.12■□□□□ 0.65
CHGBP05060 SRD5A3P1-201ENST00000603021 949 ntBASIC19.12■□□□□ 0.65
CHGBP05060 AC116165.1-201ENST00000611806 668 ntBASIC19.12■□□□□ 0.65
CHGBP05060 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.12■□□□□ 0.65
CHGBP05060 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHGBP05060 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHGBP05060 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHGBP05060 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHGBP05060 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.12■□□□□ 0.65
CHGBP05060 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.11■□□□□ 0.65
CHGBP05060 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CHGBP05060 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.11■□□□□ 0.65
CHGBP05060 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.11■□□□□ 0.65
CHGBP05060 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
CHGBP05060 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.11■□□□□ 0.65
CHGBP05060 SDHAP3-202ENST00000515467 728 ntBASIC19.11■□□□□ 0.65
CHGBP05060 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.11■□□□□ 0.65
CHGBP05060 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.11■□□□□ 0.65
CHGBP05060 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.11■□□□□ 0.65
CHGBP05060 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.11■□□□□ 0.65
CHGBP05060 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.11■□□□□ 0.65
CHGBP05060 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.11■□□□□ 0.65
CHGBP05060 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.11■□□□□ 0.65
CHGBP05060 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.11■□□□□ 0.65
CHGBP05060 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.11■□□□□ 0.65
CHGBP05060 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.11■□□□□ 0.65
CHGBP05060 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHGBP05060 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHGBP05060 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.1■□□□□ 0.65
CHGBP05060 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.1■□□□□ 0.65
CHGBP05060 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms