Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 IL9RP2-201ENST00000423948 1312 ntBASIC14.46□□□□□ -0.09
HLA-DPB1P04440 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 MRPL20P1-201ENST00000400819 433 ntBASIC14.46□□□□□ -0.09
HLA-DPB1P04440 AL590627.1-203ENST00000421194 1026 ntBASIC14.46□□□□□ -0.09
HLA-DPB1P04440 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 REXO1L3P-201ENST00000622202 1288 ntBASIC14.46□□□□□ -0.09
HLA-DPB1P04440 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 AC008677.1-201ENST00000519230 1561 ntBASIC14.46□□□□□ -0.09
HLA-DPB1P04440 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 AC005622.1-201ENST00000636801 1703 ntBASIC14.46□□□□□ -0.1
HLA-DPB1P04440 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 U82695.1-201ENST00000635752 1889 ntBASIC14.46□□□□□ -0.1
HLA-DPB1P04440 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HLA-DPB1P04440 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 AC009947.1-201ENST00000444350 727 ntBASIC14.45□□□□□ -0.1
HLA-DPB1P04440 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 AC104109.2-201ENST00000602919 1418 ntBASIC14.45□□□□□ -0.1
HLA-DPB1P04440 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 AC120114.3-201ENST00000611923 658 ntBASIC14.45□□□□□ -0.1
HLA-DPB1P04440 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 AC007292.2-201ENST00000593524 1812 ntBASIC14.45□□□□□ -0.1
HLA-DPB1P04440 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HLA-DPB1P04440 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 LINC01101-201ENST00000622953 1884 ntBASIC14.44□□□□□ -0.1
HLA-DPB1P04440 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms