Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT6AP02538 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.56■□□□□ 0.08
KRT6AP02538 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 AL671277.1-201ENST00000429656 993 ntBASIC15.56■□□□□ 0.08
KRT6AP02538 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT6AP02538 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.56■□□□□ 0.08
KRT6AP02538 AL138918.1-201ENST00000568306 659 ntBASIC15.56■□□□□ 0.08
KRT6AP02538 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KRT6AP02538 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.56■□□□□ 0.08
KRT6AP02538 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KRT6AP02538 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT6AP02538 AC022532.1-201ENST00000624563 1728 ntBASIC15.56■□□□□ 0.08
KRT6AP02538 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 AC104640.1-201ENST00000562617 2109 ntBASIC15.56■□□□□ 0.08
KRT6AP02538 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT6AP02538 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT6AP02538 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT6AP02538 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6AP02538 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6AP02538 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6AP02538 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6AP02538 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6AP02538 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6AP02538 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6AP02538 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6AP02538 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6AP02538 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
KRT6AP02538 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.55■□□□□ 0.08
KRT6AP02538 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6AP02538 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6AP02538 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6AP02538 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
KRT6AP02538 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6AP02538 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6AP02538 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6AP02538 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
KRT6AP02538 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT6AP02538 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT6AP02538 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6AP02538 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6AP02538 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6AP02538 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6AP02538 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6AP02538 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT6AP02538 AC008267.7-201ENST00000624570 1194 ntBASIC15.55■□□□□ 0.08
KRT6AP02538 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT6AP02538 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6AP02538 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6AP02538 AC126177.1-201ENST00000547829 2218 ntBASIC15.55■□□□□ 0.08
KRT6AP02538 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT6AP02538 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT6AP02538 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
KRT6AP02538 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
KRT6AP02538 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
KRT6AP02538 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT6AP02538 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT6AP02538 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
KRT6AP02538 TFAMP1-201ENST00000412727 736 ntBASIC15.54■□□□□ 0.08
KRT6AP02538 AL355306.1-201ENST00000415580 579 ntBASIC15.54■□□□□ 0.08
KRT6AP02538 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT6AP02538 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
KRT6AP02538 RN7SL589P-201ENST00000481268 310 ntBASIC15.54■□□□□ 0.08
KRT6AP02538 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT6AP02538 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT6AP02538 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.54■□□□□ 0.08
KRT6AP02538 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT6AP02538 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.54■□□□□ 0.08
KRT6AP02538 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT6AP02538 AC243562.2-201ENST00000561247 970 ntBASIC15.54■□□□□ 0.08
KRT6AP02538 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT6AP02538 AL135744.1-201ENST00000565098 629 ntBASIC15.54■□□□□ 0.08
KRT6AP02538 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.54■□□□□ 0.08
KRT6AP02538 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 AC027307.2-201ENST00000591252 911 ntBASIC15.54■□□□□ 0.08
KRT6AP02538 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT6AP02538 AC091812.2-201ENST00000619081 385 ntBASIC15.54■□□□□ 0.08
KRT6AP02538 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
KRT6AP02538 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT6AP02538 AC134407.2-201ENST00000625089 1978 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms