Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 AL080243.2-201ENST00000418783 582 ntBASIC12.37□□□□□ -0.43
TRBV12-3P01733 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 AC092580.3-201ENST00000430932 139 ntBASIC12.37□□□□□ -0.43
TRBV12-3P01733 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 CYMP-203ENST00000474680 1263 ntBASIC12.37□□□□□ -0.43
TRBV12-3P01733 IGHV3-42-201ENST00000520410 361 ntBASIC12.37□□□□□ -0.43
TRBV12-3P01733 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 AL390955.2-201ENST00000603032 514 ntBASIC12.37□□□□□ -0.43
TRBV12-3P01733 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 AC073592.8-201ENST00000624126 511 ntBASIC12.37□□□□□ -0.43
TRBV12-3P01733 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 REXO1L1P-202ENST00000608646 1974 ntBASIC12.37□□□□□ -0.43
TRBV12-3P01733 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 AC007950.2-201ENST00000615045 2347 ntBASIC12.37□□□□□ -0.43
TRBV12-3P01733 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.37□□□□□ -0.43
TRBV12-3P01733 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRBV12-3P01733 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 AC097493.3-201ENST00000509725 367 ntBASIC12.36□□□□□ -0.43
TRBV12-3P01733 AC027369.6-201ENST00000525520 931 ntBASIC12.36□□□□□ -0.43
TRBV12-3P01733 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 AL390754.1-201ENST00000619088 582 ntBASIC12.36□□□□□ -0.43
TRBV12-3P01733 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 KRT8P37-201ENST00000451609 1420 ntBASIC12.36□□□□□ -0.43
TRBV12-3P01733 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms