Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.55□□□□□ -0.4
ZNF253O75346 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF253O75346 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ZNF253O75346 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 CDC14C-201ENST00000428251 1719 ntBASIC12.54□□□□□ -0.4
ZNF253O75346 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 AC106881.1-201ENST00000605849 3329 ntBASIC12.54□□□□□ -0.4
ZNF253O75346 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 AL137784.3-201ENST00000623858 2288 ntBASIC12.54□□□□□ -0.4
ZNF253O75346 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ZNF253O75346 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ZNF253O75346 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ZNF253O75346 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.54□□□□□ -0.4
ZNF253O75346 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.54□□□□□ -0.4
ZNF253O75346 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
ZNF253O75346 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF253O75346 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF253O75346 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF253O75346 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF253O75346 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 LINC02447-202ENST00000501888 2146 ntBASIC12.53□□□□□ -0.4
ZNF253O75346 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ZNF253O75346 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ZNF253O75346 AL592424.1-201ENST00000563624 1536 ntBASIC12.53□□□□□ -0.4
ZNF253O75346 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF253O75346 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF253O75346 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ZNF253O75346 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF253O75346 AC006504.4-201ENST00000592118 1568 ntBASIC12.53□□□□□ -0.4
ZNF253O75346 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms