Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AP001889.1-201ENST00000525414 633 ntBASIC18.58■□□□□ 0.56
CTNND1O60716 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.58■□□□□ 0.56
CTNND1O60716 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.58■□□□□ 0.56
CTNND1O60716 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 AC120045.2-201ENST00000567334 178 ntBASIC18.58■□□□□ 0.56
CTNND1O60716 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.58■□□□□ 0.56
CTNND1O60716 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 AL049840.4-201ENST00000602422 811 ntBASIC18.58■□□□□ 0.56
CTNND1O60716 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.58■□□□□ 0.56
CTNND1O60716 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.58■□□□□ 0.56
CTNND1O60716 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.58■□□□□ 0.56
CTNND1O60716 AC134407.2-201ENST00000625089 1978 ntBASIC18.58■□□□□ 0.56
CTNND1O60716 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.58■□□□□ 0.56
CTNND1O60716 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.58■□□□□ 0.56
CTNND1O60716 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.57■□□□□ 0.56
CTNND1O60716 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.57■□□□□ 0.56
CTNND1O60716 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CTNND1O60716 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 C1QBPP1-201ENST00000400117 770 ntBASIC18.57■□□□□ 0.56
CTNND1O60716 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.57■□□□□ 0.56
CTNND1O60716 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTNND1O60716 ACTBP11-201ENST00000436287 1126 ntBASIC18.57■□□□□ 0.56
CTNND1O60716 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.57■□□□□ 0.56
CTNND1O60716 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.57■□□□□ 0.56
CTNND1O60716 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.57■□□□□ 0.56
CTNND1O60716 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CTNND1O60716 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.57■□□□□ 0.56
CTNND1O60716 HNRNPUP1-201ENST00000554987 333 ntBASIC18.57■□□□□ 0.56
CTNND1O60716 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.57■□□□□ 0.56
CTNND1O60716 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 AC009486.1-201ENST00000569860 813 ntBASIC18.57■□□□□ 0.56
CTNND1O60716 MIR4525-201ENST00000580000 75 ntBASIC18.57■□□□□ 0.56
CTNND1O60716 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.57■□□□□ 0.56
CTNND1O60716 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.57■□□□□ 0.56
CTNND1O60716 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.57■□□□□ 0.56
CTNND1O60716 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.57■□□□□ 0.56
CTNND1O60716 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.57■□□□□ 0.56
CTNND1O60716 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTNND1O60716 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.57■□□□□ 0.56
CTNND1O60716 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.57■□□□□ 0.56
CTNND1O60716 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.57■□□□□ 0.56
CTNND1O60716 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CTNND1O60716 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTNND1O60716 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
CTNND1O60716 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.56■□□□□ 0.56
CTNND1O60716 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CTNND1O60716 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CTNND1O60716 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 AC005052.1-201ENST00000625181 2492 ntBASIC18.56■□□□□ 0.56
CTNND1O60716 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.56■□□□□ 0.56
CTNND1O60716 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.56■□□□□ 0.56
CTNND1O60716 AC099336.1-201ENST00000417053 1171 ntBASIC18.56■□□□□ 0.56
CTNND1O60716 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.56■□□□□ 0.56
CTNND1O60716 RPL7P3-201ENST00000441388 714 ntBASIC18.56■□□□□ 0.56
CTNND1O60716 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.56■□□□□ 0.56
CTNND1O60716 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.56■□□□□ 0.56
CTNND1O60716 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 FO681548.1-201ENST00000455617 1132 ntBASIC18.56■□□□□ 0.56
CTNND1O60716 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTNND1O60716 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.56■□□□□ 0.56
CTNND1O60716 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.56■□□□□ 0.56
CTNND1O60716 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.56■□□□□ 0.56
CTNND1O60716 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.56■□□□□ 0.56
CTNND1O60716 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.56■□□□□ 0.56
CTNND1O60716 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
CTNND1O60716 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTNND1O60716 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms