Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.97■□□□□ 0.15
LDB2O43679 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
LDB2O43679 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.97■□□□□ 0.15
LDB2O43679 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.96■□□□□ 0.15
LDB2O43679 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LDB2O43679 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.96■□□□□ 0.15
LDB2O43679 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.96■□□□□ 0.15
LDB2O43679 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.96■□□□□ 0.15
LDB2O43679 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.96■□□□□ 0.15
LDB2O43679 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LDB2O43679 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 AL079307.3-201ENST00000556114 283 ntBASIC15.96■□□□□ 0.15
LDB2O43679 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.96■□□□□ 0.15
LDB2O43679 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LDB2O43679 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.96■□□□□ 0.15
LDB2O43679 AL355385.1-201ENST00000606123 409 ntBASIC15.96■□□□□ 0.15
LDB2O43679 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.96■□□□□ 0.15
LDB2O43679 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LDB2O43679 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LDB2O43679 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB2O43679 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB2O43679 AC092127.1-201ENST00000567093 3455 ntBASIC15.96■□□□□ 0.14
LDB2O43679 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
LDB2O43679 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LDB2O43679 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.96■□□□□ 0.14
LDB2O43679 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LDB2O43679 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LDB2O43679 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.96■□□□□ 0.14
LDB2O43679 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB2O43679 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB2O43679 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 AC020658.6-201ENST00000623564 1870 ntBASIC15.95■□□□□ 0.14
LDB2O43679 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.95■□□□□ 0.14
LDB2O43679 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 FO393414.2-201ENST00000405153 598 ntBASIC15.95■□□□□ 0.14
LDB2O43679 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.95■□□□□ 0.14
LDB2O43679 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB2O43679 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.95■□□□□ 0.14
LDB2O43679 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.95■□□□□ 0.14
LDB2O43679 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LDB2O43679 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB2O43679 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB2O43679 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB2O43679 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms