Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2AO43633 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 REXO1L1P-202ENST00000608646 1974 ntBASIC17.98■□□□□ 0.47
CHMP2AO43633 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 AC024909.3-201ENST00000611513 2257 ntBASIC17.98■□□□□ 0.47
CHMP2AO43633 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2AO43633 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2AO43633 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2AO43633 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.98■□□□□ 0.47
CHMP2AO43633 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2AO43633 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2AO43633 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHMP2AO43633 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CHMP2AO43633 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP2AO43633 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
CHMP2AO43633 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.97■□□□□ 0.47
CHMP2AO43633 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHMP2AO43633 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHMP2AO43633 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.97■□□□□ 0.47
CHMP2AO43633 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP2AO43633 SPDYE18-201ENST00000510091 1050 ntBASIC17.97■□□□□ 0.47
CHMP2AO43633 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP2AO43633 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.97■□□□□ 0.47
CHMP2AO43633 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP2AO43633 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.97■□□□□ 0.47
CHMP2AO43633 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CHMP2AO43633 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.97■□□□□ 0.47
CHMP2AO43633 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP2AO43633 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHMP2AO43633 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2AO43633 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHMP2AO43633 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHMP2AO43633 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.96■□□□□ 0.47
CHMP2AO43633 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP2AO43633 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 AC104794.3-201ENST00000566840 1248 ntBASIC17.96■□□□□ 0.47
CHMP2AO43633 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMP2AO43633 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.96■□□□□ 0.47
CHMP2AO43633 LINC02084-201ENST00000606069 1096 ntBASIC17.96■□□□□ 0.47
CHMP2AO43633 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.96■□□□□ 0.47
CHMP2AO43633 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.96■□□□□ 0.47
CHMP2AO43633 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP2AO43633 LINC02447-202ENST00000501888 2146 ntBASIC17.96■□□□□ 0.47
CHMP2AO43633 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP2AO43633 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHMP2AO43633 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.96■□□□□ 0.47
CHMP2AO43633 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2AO43633 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.96■□□□□ 0.46
CHMP2AO43633 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP2AO43633 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 CDC14C-201ENST00000428251 1719 ntBASIC17.95■□□□□ 0.46
CHMP2AO43633 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP2AO43633 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.95■□□□□ 0.46
CHMP2AO43633 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP2AO43633 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.95■□□□□ 0.46
CHMP2AO43633 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.95■□□□□ 0.46
CHMP2AO43633 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.95■□□□□ 0.46
CHMP2AO43633 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms