Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.24□□□□□ -0.13
SGCEO43556 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.24□□□□□ -0.13
SGCEO43556 AC022188.1-201ENST00000620960 1664 ntBASIC14.24□□□□□ -0.13
SGCEO43556 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SGCEO43556 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SGCEO43556 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.24□□□□□ -0.13
SGCEO43556 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 HTR5BP-201ENST00000430851 1154 ntBASIC14.24□□□□□ -0.13
SGCEO43556 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.24□□□□□ -0.13
SGCEO43556 DNAJB3-201ENST00000446806 729 ntBASIC14.24□□□□□ -0.13
SGCEO43556 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.24□□□□□ -0.13
SGCEO43556 AL138918.1-201ENST00000568306 659 ntBASIC14.24□□□□□ -0.13
SGCEO43556 AC027307.2-201ENST00000591252 911 ntBASIC14.24□□□□□ -0.13
SGCEO43556 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.24□□□□□ -0.13
SGCEO43556 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.24□□□□□ -0.13
SGCEO43556 AC073389.1-201ENST00000595595 795 ntBASIC14.24□□□□□ -0.13
SGCEO43556 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.24□□□□□ -0.13
SGCEO43556 AC026120.1-201ENST00000611536 926 ntBASIC14.24□□□□□ -0.13
SGCEO43556 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SGCEO43556 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.24□□□□□ -0.13
SGCEO43556 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.24□□□□□ -0.13
SGCEO43556 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SGCEO43556 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SGCEO43556 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SGCEO43556 CICP14-201ENST00000629111 2732 ntBASIC14.23□□□□□ -0.13
SGCEO43556 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
SGCEO43556 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SGCEO43556 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SGCEO43556 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 ADH5P3-201ENST00000433842 1137 ntBASIC14.23□□□□□ -0.13
SGCEO43556 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SGCEO43556 AC245100.5-201ENST00000452108 331 ntBASIC14.23□□□□□ -0.13
SGCEO43556 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.23□□□□□ -0.13
SGCEO43556 AC098859.1-201ENST00000502915 1238 ntBASIC14.23□□□□□ -0.13
SGCEO43556 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.23□□□□□ -0.13
SGCEO43556 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
SGCEO43556 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.23□□□□□ -0.13
SGCEO43556 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
SGCEO43556 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SGCEO43556 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
SGCEO43556 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SGCEO43556 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.23□□□□□ -0.13
SGCEO43556 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SGCEO43556 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SGCEO43556 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SGCEO43556 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
SGCEO43556 AL365203.3-201ENST00000609742 2057 ntBASIC14.22□□□□□ -0.13
SGCEO43556 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SGCEO43556 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.22□□□□□ -0.13
SGCEO43556 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms