Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FOXO1B-201ENST00000504678 1527 ntBASIC15.96■□□□□ 0.15
PHGDHO43175 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PHGDHO43175 MED15P5-201ENST00000423150 992 ntBASIC15.96■□□□□ 0.15
PHGDHO43175 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.96■□□□□ 0.15
PHGDHO43175 FDX1P1-201ENST00000449115 551 ntBASIC15.96■□□□□ 0.15
PHGDHO43175 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PHGDHO43175 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.96■□□□□ 0.15
PHGDHO43175 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.96■□□□□ 0.15
PHGDHO43175 RNA5SP416-201ENST00000516838 111 ntBASIC15.96■□□□□ 0.15
PHGDHO43175 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
PHGDHO43175 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.96■□□□□ 0.15
PHGDHO43175 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.96■□□□□ 0.15
PHGDHO43175 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.96■□□□□ 0.15
PHGDHO43175 AC120114.3-201ENST00000611923 658 ntBASIC15.96■□□□□ 0.15
PHGDHO43175 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
PHGDHO43175 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 AC018892.3-201ENST00000623986 2499 ntBASIC15.96■□□□□ 0.15
PHGDHO43175 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PHGDHO43175 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.96■□□□□ 0.14
PHGDHO43175 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.96■□□□□ 0.14
PHGDHO43175 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PHGDHO43175 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.95■□□□□ 0.14
PHGDHO43175 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
PHGDHO43175 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PHGDHO43175 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.95■□□□□ 0.14
PHGDHO43175 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.95■□□□□ 0.14
PHGDHO43175 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
PHGDHO43175 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.95■□□□□ 0.14
PHGDHO43175 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.95■□□□□ 0.14
PHGDHO43175 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 KRT18P3-201ENST00000451602 1288 ntBASIC15.95■□□□□ 0.14
PHGDHO43175 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PHGDHO43175 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.95■□□□□ 0.14
PHGDHO43175 AC073389.1-201ENST00000595595 795 ntBASIC15.95■□□□□ 0.14
PHGDHO43175 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.95■□□□□ 0.14
PHGDHO43175 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
PHGDHO43175 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.95■□□□□ 0.14
PHGDHO43175 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PHGDHO43175 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PHGDHO43175 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHGDHO43175 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PHGDHO43175 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.94■□□□□ 0.14
PHGDHO43175 FLJ16779-201ENST00000612722 7638 ntBASIC15.94■□□□□ 0.14
PHGDHO43175 AC067930.6-201ENST00000623257 4947 ntBASIC15.94■□□□□ 0.14
PHGDHO43175 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PHGDHO43175 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.94■□□□□ 0.14
PHGDHO43175 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PHGDHO43175 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.94■□□□□ 0.14
PHGDHO43175 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.94■□□□□ 0.14
PHGDHO43175 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.94■□□□□ 0.14
PHGDHO43175 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.94■□□□□ 0.14
PHGDHO43175 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.94■□□□□ 0.14
PHGDHO43175 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.94■□□□□ 0.14
PHGDHO43175 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
PHGDHO43175 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHGDHO43175 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms