Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC005912.2-201ENST00000619492 2400 ntBASIC11.76□□□□□ -0.53
SMKR1H3BMG3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 AC005521.1-201ENST00000393351 872 ntBASIC11.76□□□□□ -0.53
SMKR1H3BMG3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 AC079781.5-202ENST00000641784 3743 ntBASIC11.76□□□□□ -0.53
SMKR1H3BMG3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SMKR1H3BMG3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 CHCHD2P8-201ENST00000429873 447 ntBASIC11.75□□□□□ -0.53
SMKR1H3BMG3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 AC087641.1-201ENST00000557561 1021 ntBASIC11.75□□□□□ -0.53
SMKR1H3BMG3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 Z69720.1-201ENST00000601483 472 ntBASIC11.75□□□□□ -0.53
SMKR1H3BMG3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 AP001350.2-201ENST00000625104 1094 ntBASIC11.75□□□□□ -0.53
SMKR1H3BMG3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.75□□□□□ -0.53
SMKR1H3BMG3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms