Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 ADM-202ENST00000524948 584 ntTSL 2 BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 AC079328.1-201ENST00000560358 952 ntBASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PLEKHD1A6NEE1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 REEP1-202ENST00000453231 940 ntTSL 2 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 AC020914.3-201ENST00000594712 304 ntBASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PLEKHD1A6NEE1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 ALOX12P2-203ENST00000570921 1945 ntBASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 AC018735.1-201ENST00000437208 1502 ntBASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 ACTBP8-201ENST00000403258 1108 ntBASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 HIST2H2BC-201ENST00000498492 580 ntBASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 AC015967.2-201ENST00000624092 234 ntBASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 AC006435.4-201ENST00000625037 234 ntBASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 AL356737.1-201ENST00000634391 234 ntBASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PLEKHD1A6NEE1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 MIR663B-201ENST00000408361 115 ntBASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 AC016629.1-201ENST00000596579 586 ntBASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC24.21■■□□□ 1.47
PLEKHD1A6NEE1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
PLEKHD1A6NEE1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PLEKHD1A6NEE1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
PLEKHD1A6NEE1 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms