Protein–RNA interactions for Protein: A2RUT3

TMEM89, Transmembrane protein 89, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM89A2RUT3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
TMEM89A2RUT3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 AC005229.1-201ENST00000392885 409 ntBASIC12.64□□□□□ -0.39
TMEM89A2RUT3 MIR1247-201ENST00000408206 136 ntBASIC12.64□□□□□ -0.39
TMEM89A2RUT3 GPAA1P2-201ENST00000417923 928 ntBASIC12.64□□□□□ -0.39
TMEM89A2RUT3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 AP000812.2-201ENST00000538934 718 ntBASIC12.64□□□□□ -0.39
TMEM89A2RUT3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 MIR3615-201ENST00000581999 87 ntBASIC12.64□□□□□ -0.39
TMEM89A2RUT3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 UBALD1-205ENST00000590891 2641 ntBASIC12.64□□□□□ -0.39
TMEM89A2RUT3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM89A2RUT3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 HIST3H2BA-201ENST00000436555 524 ntBASIC12.63□□□□□ -0.39
TMEM89A2RUT3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 BCRP2-202ENST00000447763 634 ntBASIC12.63□□□□□ -0.39
TMEM89A2RUT3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 BCRP6-201ENST00000510112 632 ntBASIC12.63□□□□□ -0.39
TMEM89A2RUT3 BCRP7-201ENST00000511549 544 ntBASIC12.63□□□□□ -0.39
TMEM89A2RUT3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 ENPP7P5-201ENST00000541031 1031 ntBASIC12.63□□□□□ -0.39
TMEM89A2RUT3 PTP4A1P2-201ENST00000546033 454 ntBASIC12.63□□□□□ -0.39
TMEM89A2RUT3 AC079316.1-201ENST00000548397 411 ntBASIC12.63□□□□□ -0.39
TMEM89A2RUT3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 AC243562.2-201ENST00000561247 970 ntBASIC12.63□□□□□ -0.39
TMEM89A2RUT3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 AL391069.4-201ENST00000609583 481 ntBASIC12.63□□□□□ -0.39
TMEM89A2RUT3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 AP001282.1-201ENST00000531301 1499 ntBASIC12.63□□□□□ -0.39
TMEM89A2RUT3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM89A2RUT3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms