Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 C1QBPP1-201ENST00000400117 770 ntBASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB7Q9Y5E2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 FAM86MP-201ENST00000340703 885 ntBASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 AC005229.1-201ENST00000392885 409 ntBASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 AC136604.1-201ENST00000418535 575 ntBASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 AC068587.3-201ENST00000526613 355 ntBASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 AC124283.3-201ENST00000570869 594 ntBASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 AC093525.8-201ENST00000624099 1342 ntBASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 AC106886.4-201ENST00000623557 2502 ntBASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB7Q9Y5E2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 AL355864.2-201ENST00000447420 863 ntBASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 AC120045.2-201ENST00000567334 178 ntBASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms