Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 RPL7P3-201ENST00000441388 714 ntBASIC15.26■□□□□ 0.03
LHX6Q9UPM6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 MTND2P39-201ENST00000457230 764 ntBASIC15.26■□□□□ 0.03
LHX6Q9UPM6 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 RRP7BP-205ENST00000566851 833 ntBASIC15.26■□□□□ 0.03
LHX6Q9UPM6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 AC097655.1-201ENST00000635075 318 ntBASIC15.26■□□□□ 0.03
LHX6Q9UPM6 AL590396.2-201ENST00000636511 1041 ntBASIC15.26■□□□□ 0.03
LHX6Q9UPM6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 AL645608.8-201ENST00000606034 2086 ntBASIC15.26■□□□□ 0.03
LHX6Q9UPM6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.25■□□□□ 0.03
LHX6Q9UPM6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 FAM220BP-201ENST00000377689 816 ntBASIC15.25■□□□□ 0.03
LHX6Q9UPM6 AL662890.1-201ENST00000396818 632 ntBASIC15.25■□□□□ 0.03
LHX6Q9UPM6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 AC104457.1-201ENST00000401024 814 ntBASIC15.25■□□□□ 0.03
LHX6Q9UPM6 AL121949.1-201ENST00000402043 968 ntBASIC15.25■□□□□ 0.03
LHX6Q9UPM6 OR2X1P-201ENST00000421144 687 ntBASIC15.25■□□□□ 0.03
LHX6Q9UPM6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 AL589987.1-201ENST00000453380 819 ntBASIC15.25■□□□□ 0.03
LHX6Q9UPM6 TMEM198B-204ENST00000484016 896 ntBASIC15.25■□□□□ 0.03
LHX6Q9UPM6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 AC009542.2-202ENST00000619004 1067 ntBASIC15.25■□□□□ 0.03
LHX6Q9UPM6 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 LINC00554-201ENST00000564841 3011 ntBASIC15.25■□□□□ 0.03
LHX6Q9UPM6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LHX6Q9UPM6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 CDC14C-201ENST00000428251 1719 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms