Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 RPSAP43-201ENST00000402237 625 ntBASIC13.28□□□□□ -0.28
CALYQ9NYX4 AC004461.1-201ENST00000412461 403 ntBASIC13.28□□□□□ -0.28
CALYQ9NYX4 RPS8P6-201ENST00000426177 609 ntBASIC13.28□□□□□ -0.28
CALYQ9NYX4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 AC112482.1-201ENST00000492080 688 ntBASIC13.28□□□□□ -0.28
CALYQ9NYX4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 AP000344.2-201ENST00000512987 629 ntBASIC13.28□□□□□ -0.28
CALYQ9NYX4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 AC092865.5-201ENST00000545435 363 ntBASIC13.28□□□□□ -0.28
CALYQ9NYX4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 RARRES2P9-201ENST00000565168 469 ntBASIC13.28□□□□□ -0.28
CALYQ9NYX4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.28□□□□□ -0.28
CALYQ9NYX4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CALYQ9NYX4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.28□□□□□ -0.28
CALYQ9NYX4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CALYQ9NYX4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CALYQ9NYX4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CALYQ9NYX4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CALYQ9NYX4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CALYQ9NYX4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CALYQ9NYX4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.27□□□□□ -0.28
CALYQ9NYX4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CALYQ9NYX4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CALYQ9NYX4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 AL627223.1-201ENST00000416693 442 ntBASIC13.27□□□□□ -0.29
CALYQ9NYX4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 AL139010.1-201ENST00000454878 894 ntBASIC13.27□□□□□ -0.29
CALYQ9NYX4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 AC004835.2-201ENST00000603762 682 ntBASIC13.27□□□□□ -0.29
CALYQ9NYX4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CALYQ9NYX4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CALYQ9NYX4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 AL162727.3-201ENST00000635661 2787 ntBASIC13.26□□□□□ -0.29
CALYQ9NYX4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CALYQ9NYX4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.26□□□□□ -0.29
CALYQ9NYX4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CALYQ9NYX4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CALYQ9NYX4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.26□□□□□ -0.29
CALYQ9NYX4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.26□□□□□ -0.29
CALYQ9NYX4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CALYQ9NYX4 AC004987.2-201ENST00000395959 1148 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms