Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 AC105917.1-201ENST00000506637 2539 ntBASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 TUBB3P1-201ENST00000405796 1332 ntBASIC20.53■□□□□ 0.88
SMC4Q9NTJ3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.52■□□□□ 0.88
SMC4Q9NTJ3 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.52■□□□□ 0.87
SMC4Q9NTJ3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.52■□□□□ 0.87
SMC4Q9NTJ3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMC4Q9NTJ3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMC4Q9NTJ3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 AC125807.1-201ENST00000483097 614 ntBASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 CICP13-201ENST00000422015 2789 ntBASIC20.51■□□□□ 0.87
SMC4Q9NTJ3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 AZGP1P1-201ENST00000411909 902 ntBASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 AL079307.3-201ENST00000556114 283 ntBASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 AL589739.1-201ENST00000607720 493 ntBASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms